Effect of Enterococcus faecalis OG1RF on human calvarial osteoblast apoptosis

Background Enterococcus faecalis is a dominant pathogen in the root canals of teeth with persistent apical periodontitis (PAP), and osteoblast apoptosis contributes to imbalanced bone remodelling in PAP. Here, we investigated the effect of E. faecalis OG1RF on apoptosis in primary human calvarial osteoblasts. Specifically, the expression of apoptosis-related genes and the role of anti-apoptotic and pro-apoptotic members of the BCL-2 family were examined. Methods Primary human calvarial osteoblasts were incubated with E. faecalis OG1RF at multiplicities of infection corresponding to infection time points. Flow cytometry, terminal deoxynucleotidyl transferase dUTP nick end labelling (TUNEL) assay, caspase-3/-8/-9 activity assay, polymerase chain reaction (PCR) array, and quantitative real-time PCR were used to assess osteoblast apoptosis. Results E. faecalis infection increased the number of early- and late-phase apoptotic cells and TUNEL-positive cells, decreased the mitochondrial membrane potential (ΔΨm), and activated the caspase-3/-8/-9 pathway. Moreover, of all 84 apoptosis-related genes in the PCR array, the expression of 16 genes was upregulated and that of four genes was downregulated in the infected osteoblasts. Notably, the mRNA expression of anti-apoptotic BCL2 was downregulated, whereas that of the pro-apoptotic BCL2L11, HRK, BIK, BMF, NOXA, and BECN1 and anti-apoptotic BCL2A1 was upregulated. Conclusions E. faecalis OG1RF infection triggered apoptosis in human calvarial osteoblasts, and BCL-2 family members acted as regulators of osteoblast apoptosis. Therefore, BCL-2 family members may act as potential therapeutic targets for persistent apical periodontitis.


Background
Persistent apical periodontitis (PAP) is an endodontic inflammatory condition characterised by bone destruction in the periapical region [1]. Inflammatory bone destruction is generally associated with an imbalance between bone degradation and formation [2]. In addition to enhanced osteoclastogenesis and subsequential bone resorption, increased osteoblast apoptosis decreases the synthesis of bone matrix and deposition of new bone, resulting in bone loss in inflammatory bone diseases [3]. Bacteria and their by-products are considered responsible for osteoblast apoptosis in osteomyelitis, periodontitis, and PAP [4][5][6]. Evidence has highlighted that Enterococcus faecalis is one of the causative microorganisms of PAP [7,8]. The detection of E. faecalis in infected root canals has been associated with the occurrence of periapical lesions larger than 3 mm, indicating the role of E. faecalis in PAP and endodontic treatment failure [9]. Recent studies have found that E. faecalis induces apoptosis in mouse osteoblast-like MC3T3 cells and human osteosarcoma MG63 cells [10][11][12]. However, there may be a difference between the effect of E. faecalis infection in primary osteoblasts and osteoblast-like cells from different origins [10,13]. The apoptosis-inducing effect of E. faecalis and its mechanisms in human primary osteoblasts remain elusive.
Bacteria may induce apoptosis in osteoblasts via intrinsic (caspase-9 dependent) and/or extrinsic (caspase-8 dependent) pathway(s) through the activation of executioner caspase-3 [5,11]. Apoptosis-related genes, such as tumour necrosis factor receptor superfamily (TNFRSF) and caspase activity inhibitors (e.g., BIRC6, NAIP, and XIAP), may also play important roles in infectioninduced apoptosis [14]. Notably, the B-cell lymphoma-2 (BCL-2) family plays a key role in the intrinsic apoptotic pathway [15]. The sophisticated modulation of the balance between anti-apoptotic and pro-apoptotic members of the BCL-2 family can determine cell fate decisions of life or death, giving rise to numerous diseases, such as cancer and autoimmune diseases [16,17]. Studies have reported that anti-apoptotic BCL-2 and BCL2L1 (also known as BCLXL), and pro-apoptotic BID, BIM, and BAX may play roles in the pathogenesis of periodontitis [5,18,19]. BCL-2, BCL2L1, BAD, and BAX may also be involved in the molecular mechanisms linking periodontal disease with cancer [20]. However, the putative role of the BCL-2 family and other apoptosis-related genes in E. faecalis-infected primary osteoblasts remains inconclusive.
Here, we investigated the apoptotic effect of E. faecalis OG1RF on primary human calvarial osteoblasts. The strain OG1RF is a rifampicin-and fusidic acid-resistant derivative of a caries-related strain OG1 isolated in 1975 [21,22]. Because of its oral rather than urinary origin (e.g., ATCC 29,212), it is commonly used to investigate the pathogenicity of E. faecalis in apical periodontitis [23,24]. We examined the mRNA expression of 84 apoptosisrelated genes, and explored the role of anti-apoptotic and pro-apoptotic members of the BCL-2 family in E. faecalis-induced osteoblast apoptosis.
To examine the effect of E. faecalis OG1RF on osteoblast apoptosis, the cells were plated onto 24-well plates at 1.5 × 10 5 /well or six-well plates at 6 × 10 5 /well. At the indicated infection time points, E. faecalis OG1RF at the corresponding multiplicity of infection (MOI) was added to the osteoblast culture, as previously described [12].

Flow cytometry
To evaluate the apoptotic rate of cells (in early and late phases), primary osteoblasts were incubated with E. faecalis OG1RF at MOIs of 10, 100, 500, and 1,000 for 6 and 12 h, respectively. The infected cells were incubated with staining solution containing propidium iodide (PI) and FITC Annexin V (#556,570; BD Biosciences, San Diego, CA, USA) at 25 °C for 15 min. The apoptotic cells in early (FITC Annexin V + /PI − ) and late (FITC Annexin V + /PI + ) phases were analysed using a FACSCalibur flow cytometer (BD Biosciences, San Diego, CA, USA).
To detect the change in mitochondrial membrane potential (ΔΨm), primary osteoblasts were incubated with E. faecalis OG1RF at MOIs of 10, 100, 500, and 1,000 for 6 and 12 h, respectively. The infected cells were incubated with 0.5 mL of JC-1 staining solution (#C2006; Beyotime, Shanghai, China) and evaluated using a FACS-Calibur flow cytometer. The ΔΨm was estimated by calculating the ratio of red/green fluorescence intensities as previously reported [12].

Terminal deoxynucleotidyl transferase dUTP nick end labelling (TUNEL) assay
To examine DNA damage in apoptotic cells, primary osteoblasts were infected with E. faecalis OG1RF at an MOI of 1,000 for 12 h. After fixation and permeabilization, the infected cells were treated with a reaction mixture containing the label and enzyme solutions (#11,684,817,910; Roche, Penzberg, Bayern, Germany) at 37 °C for 60 min to detect TUNEL-positive cells in randomly selected microscopic fields. A 50-µL label solution without TUNEL enzyme was used as the negative control to detect nonspecific labelling.

Human polymerase chain reaction (PCR) array
To explore the mRNA expression profile of apoptosisrelated genes in apoptotic osteoblasts, primary osteoblasts were incubated with E. faecalis OG1RF at an MOI of 1,000 for 12 h. The Human Apoptosis RT Profile PCR Array (#PAHS-012Z; SABiosciences, Valencia, CA, USA) was employed to simultaneously evaluate the expression of 84 apoptosis-related genes in E. faecalis-infected osteoblasts according to the manufacturer's instructions. A P-value < 0.05 with a fold change > 2 (following normalisation to housekeeping genes) was regarded as a significant upregulation or downregulation in mRNA expression.

Quantitative real-time PCR (qRT-PCR)
To validate the results of the PCR array and further evaluate the expression of BCL-2 family members, primary osteoblasts were infected with E. faecalis OG1RF at an MOI of 1,000 for 12 h. Total RNA was extracted using TRIzol reagent (#15,596,018; Invitrogen, Carlsbad, CA, USA) and quantified using Nanodrop spectrophotometer (Thermo Scientific, Wilmington, DE, USA), followed by cDNA synthesis using a reverse transcription kit (#RR036A; Takara, Kyoto, Japan). qRT-PCR was performed under universal cycling conditions using SYBR Premix Ex TaqII (#RR820A; Takara, Kyoto, Japan) in a CFX96 Real-Time PCR System (Agilent Technologies, Santa Clara, CA, USA). The 2 −ΔΔCt method was used to determine the expression of the following genes: BCL2, BCL2L11 (also known as BIM), HRK, BIK, BCL2A1 (also known as BFL1), CASP10, BMF, PMAIP1 (also known as NOXA), BECN1, BAD, BAX, HUWE1 (also known as MULE), BCL2L12, BBC3 (also known as PUMA), and BOK. Primer sequences are listed in Table 1.

Statistical analysis
All experiments were conducted in triplicate. Statistical analysis was performed using one-way analysis of variance followed by Tukey's post hoc test using SPSS 21.0. A P value of < 0.05 was considered statistically significant.

E. faecalis infection triggered early and late apoptosis in primary osteoblasts
To detect apoptosis (both in early and late phases) in osteoblasts infected with E. faecalis OG1RF, we conducted flow cytometry analysis using Annexin V-FITC/ PI staining (Fig. 1a). Figure 1b shows the percentage of apoptotic cells in osteoblasts infected with E. faecalis OG1RF for 6 and 12 h. At 6 h, the peak of early apoptosis was observed at an MOI of 500 (P < 0.05), whereas at 12 h, it was observed at an MOI of 100 (P < 0.01). At 6 h, the percentage of apoptotic cells in the late phase was increased at MOIs of 500 and 1,000 compared with that in the control group (P < 0.01), whereas at 12 h, the increase showed an MOI-dependent trend (P < 0.05). Furthermore, there were more late apoptotic cells at a higher MOI (MOIs of 500 and 1,000), regardless of the infection time (6 or 12 h), and more early apoptotic cells were observed at a lower MOI (10 and 100) at 12 h (P < 0.05).

E. faecalis infection caused DNA fragmentation in primary osteoblasts
To examine the DNA damage in osteoblasts infected with E. faecalis OG1RF, we conducted TUNEL staining. TUNEL-positive cells were detected in osteoblasts following infection with an MOI of 1,000 for 12 h (Fig. 2). We observed few TUNEL-positive cells in both the negative and blank controls.

E. faecalis infection decreased ΔΨm in primary osteoblasts
To detect ΔΨm in osteoblasts infected with E. faecalis OG1RF, we conducted flow cytometry analysis using JC-1 staining (Fig. 3a). We found a significant decrease in the ratio of red/green fluorescence intensities in osteoblasts following infection with MOIs of 500 and 1,000 for 6 h and MOIs of 100, 500, and 1,000 for 12 h compared with that in the control group (P < 0.05), suggesting remarkably reduced ΔΨm and activated intrinsic apoptosis (Fig. 3b).

Intrinsic and extrinsic apoptosis were involved in E. faecalis-infected osteoblasts
Extrinsic and intrinsic apoptosis is initiated by activation of caspase-8 and caspase-9, respectively [25]. These activated initiator caspases can activate executioner caspase-3 to promote apoptosis [26]. To evaluate apoptosis in osteoblasts infected with E. faecalis OG1RF, we performed activity assays of caspase-3/-8/-9. Compared with that in the non-infected cells, the activity of caspase-3/-8/-9 was significantly increased in osteoblasts following infection at an MOI of 1000 for 12 h (P < 0.01), indicating that both intrinsic and extrinsic apoptotic pathways were involved. (Fig. 4).

E. faecalis infection induced changes in mRNA expression of apoptosis-related genes in primary osteoblasts
To identify the mRNA expression profile of apoptosisrelated genes in osteoblasts infected with E. faecalis OG1RF at an MOI of 1,000 for 12 h, we performed PCR array analysis. Of all the 84 apoptosis-related genes in the  The relative intensity of red/green fluorescence was determined. *P < 0.05 and **P < 0.01 versus the control group PCR array, the expression of 16 genes was upregulated and that of four genes was downregulated in the infected cells compared with the non-infected cells, indicating the activation of apoptosis (fold change > 2 and P < 0.05) (Fig. 5, Table 2). Notably, within the BCL-2 family, the mRNA expression of anti-apoptotic BCL2 was downregulated, whereas that of pro-apoptotic BCL2L11, HRK, and BIK and anti-apoptotic BCL2A1 was upregulated, in the infected cells. There were no changes in the mRNA levels of BAD, BID, BCL2L1, BAK, BAX, BCL2L2 (also known as BCLW), BCL2L10 (also known as BCLB), and MCL1 (fold change < 2 or P > 0.05).

Validation of the expression of apoptosis-related genes in osteoblasts infected with E. faecalis
To validate the results of the PCR array and further evaluate the expression of other BCL-2 family members, we performed qRT-PCR. The mRNA expression of BCL2 was decreased, whereas that of BCL2L11, HRK, BIK, BCL2A1, and CASP10 was increased, in osteoblasts infected at an MOI of 1,000 for 12 h (P < 0.05). The expression of BAD and BAX did not change, confirming the results of the PCR array analysis. In addition, the expression of pro-apoptotic BMF, NOXA, and BECN1 was upregulated, whereas that of PUMA, MULE, and BCL2L12 was not altered (Fig. 6a-n). BOK expression was not detected.

PAP, a common endodontic disease induced by bacterial infection and consequent inflammatory responses,
is characterised by persistent bone destruction in the periapical region [1]. Recent studies have shown that PAP lesion is associated with osteoblast apoptosis, suggesting a role of osteoblast apoptosis in the pathogenesis of PAP [27,28]. E. faecalis, as one of the primary pathogens in PAP, has been reported to be highly associated with endodontic infection, promoting the disruption of bone homeostasis [9]. Hence, it is crucial to examine the role of E. faecalis on osteoblast apoptosis in PAP. Our previous study found that E. faecalis strains from the root canals of teeth with PAP trigger apoptosis in mouse MC3TE-E1 and human MG63 cell lines [10,12]. However, the effect of E. faecalis on apoptosis in human primary osteoblasts and its mechanisms remain unclear.
In the present study, E. faecalis infection increased the number of TUNEL-positive cells and apoptotic cells in the early and late phases, which was also observed in our previous study on MC3T3-E1 and MG63 cells infected with E. faecalis [10,12]. We also noticed that necrotic cells of which the cell membrane integrity is damaged may also be stained as Annexin V-FITC/PI double-positive, as previous studies reported [29,30]. In this study, we observed that E. faecalis infection with a higher MOI can trigger more late apoptotic cells (and necrotic cells, if any), whereas a lower MOI infection induced more early apoptotic cells, suggesting that E. faecalis infection causes osteoblast apoptosis (and necrosis, if any) in an MOI-dependent way. Additionally, the mRNA expression level and activity of caspase-3/-8/-9 were elevated in the infected osteoblast group, indicating that both faecalis-infected osteoblasts. The activity of caspase-3 a, caspase-8 b, and caspase-9 c was significantly increased in the infected cells compared with the non-infected cells. **P < 0.01 versus the control group intrinsic and extrinsic apoptosis were activated in the osteoblasts infected with E. faecalis OG1RF. More precisely, the significantly decreased ΔΨm and increased expression of apoptotic peptidase activating factor 1 (APAF1) indicated the activation of intrinsic apoptosis, whereas the enhanced expression of caspase-10, which is a homologue of caspase-8, indicated the activation of the extrinsic pathway [31]. Moreover, the upregulation of TNFRSF1B, TNFRSF8, TNFRSF9, and TNFRSF10 expression, as well as elevated levels of TNF, suggested apoptotic signal transition through the TNF family membrane receptors, which was also detected in tumour cells treated with chemotherapeutic drugs [32,33]. Furthermore, the expression of caspase inhibitors NAIP, BIRC6, and XIAP was also downregulated, indicating the promotion of apoptosis. Taken all together, these data demonstrated that both intrinsic and extrinsic apoptosis were involved in human primary osteoblasts infected with E. faecalis.
To further explore the activation of the intrinsic apoptotic pathway, we analysed the expression profile of the BCL-2 family in E. faecalis-infected osteoblasts. The BCL-2 family has two subfamilies: anti-apoptotic and pro-apoptotic [34]. The anti-apoptotic members BCL-2, BCL2L1, BCL2L2, BCL2L10, BCL2A1, BCL2L12, and MCL1 exert their function via the sequestration of the pro-apoptotic members. The pro-apoptotic subfamily is further categorised into multi-domain executioners (BAK, BAX, and BOK) and the BH3-only proteins that possess only the BCL-2 homology (BH) 3 domain. The BH3-only activators, BCL2L11, BID, PUMA, and MULE, interact with both pro-apoptotic executioners and antiapoptotic members to trigger apoptosis, whereas BH3only sensitisers (BAD, BMF, HRK, NOXA, BIK, and Beclin-1) displace the BH3-only activators and executioners from the anti-apoptotic protein heteromeric complex to promote apoptosis [35]. The interplay between the BCL-2 family members triggers the multi-domain executioner oligomerisation on the mitochondrial membrane, resulting in mitochondrial outer membrane permeabilization (MOMP) and subsequent activation of the caspase cascade [36]. Here, we found that the mRNA expression of anti-apoptotic BCL2 was downregulated, whereas that of pro-apoptotic BCL2L11, HRK, BIK, BMF, NOXA, and faecalis-infected osteoblasts. Primary osteoblasts were incubated with E. faecalis OG1RF at an MOI of 1,000 for 12 h. Upregulated genes (red), downregulated genes (green), and unaltered genes (black) are presented in rows representing 89 genes (84 apoptosis-related and five housekeeping genes) and columns indicating the infection group (at an MOI of 1,000 for 12 h) and the control group BECN1 was upregulated in the infected cells. Downregulated BCL2 expression was also detected in MC3T3-E1 cells infected with E. faecalis [10]. Moreover, it has also been reported that the activator BCL2L11 and sensitisers Beclin-1 and BIK participate in osteoblast-like cell apoptosis induced by glucocorticoids, sodium fluoride, oxidative stress, and chemotherapeutic drugs [37][38][39][40]. Furthermore, decreased expression of sensitisers BMF and NOXA may increase osteoclast survival to promote bone loss [41,42]. However, the role of harakiri (HRK), a novel regulator of cell death, in bone homeostasis remains unclear. Evidence has shown that the inactivation of HRK in prostate cancer constitutes a critical component in decreased apoptosis of tumour cells, whereas HRK-mediated mitochondrial dysfunction contributes to enhanced apoptosis in human malignancies [43]. However, in lipopolysaccharide-stimulated osteoclasts, HRK expression is not altered [41]. In this study, we reported an increase in HRK expression in the infected osteoblasts, suggesting its role in bone remodelling in PAP. In addition, interestingly, we observed that the expression of anti-apoptotic BCL2A1 was significantly higher in the infected osteoblasts than in the control sample. The prosurvival potential of BCL2A1 is reported to be associated with its interaction with BCL2L11, BIK, HRK, NOXA, BID, and PUMA [44]. The level of BCL2A1 is enhanced in different types of cancer cells, resulting in tumour progression and chemotherapy resistance [45]. Porphyromonas gingivalis infection also induces the upregulation of BCL2A1 in epithelial cells [46]. In this study, as the mRNA levels of BCL2L11, BIK, HRK, and NOXA were increased, we inferred that the elevated BCL2A1 expression may act as a negative feedback factor that interacts with these four aforementioned BH3-only proteins to protect the infected osteoblasts from apoptosis. Evidently, our data suggested that these BCL-2 family members play important roles in E. faecalis-induced osteoblast apoptosis. Further studies are needed to elucidate the exact role and mechanism of the interaction of BCL-2 family members in the pathogenesis of PAP and their possible role(s) in the relationship of PAP with system diseases.

Conclusions
In conclusion, our findings demonstrated that E. faecalis OG1RF induced apoptosis in human primary osteoblasts, and both the extrinsic and intrinsic pathways were involved. Anti-apoptotic BCL-2 and BCL2A1,  Fig. 6 qRT-PCR analyses of the primary osteoblasts infected with E. faecalis OG1RF. The mRNA expression of BCL2 a was downregulated, whereas that of BCL2L11 b, HRK c, BIK d, BCL2A1 e, CASP10 f, BMF g, NOXA h, and BECN1 i was upregulated, in the infected cells at an MOI of 1,000 at 12 h. The mRNA expression of BAD j, BAX k, MULE l, BCL2L12 m, and PUMA n was not changed. *P < 0.05 and **P < 0.01 versus the control group and pro-apoptotic BCL2L11, HRK, BIK, BMF, NOXA, and Beclin-1 were also involved in osteoblast apoptosis induced by E. faecalis (Fig. 7). These results suggest that BCL-2 family members act as novel regulators of osteoblast apoptosis induced by E. faecalis and are, thus, potential therapeutic targets for PAP treatment.